MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4070_ses-1_T1w.
  • Date and time: 2022-11-03, 00:45.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5666456489463565
cnr2.351908559916591
efc0.5320401226869266
fber1890.5946528418
fwhmavg4.3584233333333335
fwhmx4.35232
fwhmy4.89751
fwhmz3.82544
icvscsf0.1929592352426893
icvsgm0.41646269602324487
icvswm0.3905780687340658
inumed1.7863789796829224
inurange0.6385590434074402
qi10.0
qi20.0039131693319203655
rpvecsf29.88687013102214
rpvegm14.660948263869209
rpvewm18.81788400813805
sizex176
sizey256
sizez256
snrcsf3.0215649020397315
snrgm9.8916246414396
snrtotal11.932469372372436
snrwm22.884218573637977
snrdcsf38.212082118817996
snrdgm91.31345811639697
snrdtotal81.89650514747377
snrdwm116.16397520720635
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.7978358876857667
summarybgmad5.639885742868911
summarybgmean12.856427868987977
summarybgmedian11.087399818003178
summarybgn2777048.0
summarybgp053.664872743189335
summarybgp9525.886063173413277
summarybgstdv6.996274662997023
summarycsfk1.3577893899452453
summarycsfmad90.5132882636035
summarycsfmean358.9304010074313
summarycsfmedian328.957121796906
summarycsfn21724.0
summarycsfp05227.96436278522015
summarycsfp95572.3162696432321
summarycsfstdv108.86727940356303
summarygmk-0.3278830202235241
summarygmmad83.70415791550566
summarygmmean788.3034007896322
summarygmmedian786.0920080170035
summarygmn22822.0
summarygmp05662.3677598387003
summarygmp95921.365244415775
summarygmstdv79.46872370119229
summarywmk1.0487857307010469
summarywmmad37.518996008963306
summarywmmean997.5325038733757
summarywmmedian1000.0231555514038
summarywmn209152.0
summarywmp05917.9346451833844
summarywmp951064.2512101456523
summarywmstdv43.69914409222227
tpmoverlapcsf0.15912316739559174
tpmoverlapgm0.4444040358066559
tpmoverlapwm0.5021764039993286
wm2max0.7307825074943715
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime16:49:31.930000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0264263, 0.997901, 0.0591268, 0.0118518, 0.0594561, -0.998161]
ImageOrientationTextSag>Cor(-1.5)>Tra(-0.8)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0294284
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2638, 5493, -7498, 179, -60, -1030, 43, -189]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp220.652
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum348a7bf5bec2d516077857c081fb2ad0
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.